Class RcsbRequestContextManager

Hierarchy

RcsbRequestContextManager

Constructors

constructor

new RcsbRequestContextManager(): RcsbRequestContextManager
Returns RcsbRequestContextManager

Properties

`Private` `Readonly` assemblyCollector

assemblyCollector: EntryAssembliesCollector = ...

`Private` `Readonly` assemblyInterfacesCollector

assemblyInterfacesCollector: AssemblyInterfacesCollector = ...

`Private` `Readonly` assemblyInterfacesMap

assemblyInterfacesMap: Map<string, Promise<AssemblyInterfacesTranslate>> = ...

`Private` `Readonly` entityChrCollector

entityChrCollector: PolymerEntityChromosomeCollector = ...

`Private` `Readonly` entityPropertyMap

entityPropertyMap: Map<string, Promise<PolymerEntityInterface>> = ...

`Private` `Readonly` entryPropertyMap

entryPropertyMap: Map<string, Promise<EntryPropertyIntreface>> = ...

`Private` `Readonly` entryToAssemblyMap

entryToAssemblyMap: Map<string, Promise<EntryAssemblyTranslate>> = ...

`Private` `Readonly` groupMemberCollector

groupMemberCollector: GroupMemberCollector = ...

`Private` `Readonly` groupPropertyMap

groupPropertyMap: Map<string, Promise<GroupPropertiesProvider>> = ...

`Private` `Readonly` instanceCollector

instanceCollector: PolymerEntityInstancesCollector = ...

`Private` `Readonly` instanceSequenceMap

instanceSequenceMap: Map<string, Promise<InstanceSequenceInterface>> = ...

`Private` `Readonly` interfaceCollector

interfaceCollector: InterfaceInstanceCollector = ...

`Private` `Readonly` interfaceToInstanceMap

interfaceToInstanceMap: Map<string, Promise<InterfaceInstanceTranslate>> = ...

`Readonly` modelKey

modelKey: string = EntryAssembliesCollector.modelKey

`Private` `Readonly` multipleEntityCollector

multipleEntityCollector: MultipleDocumentPropertyCollectorInterface<"entity_ids", PolymerEntityInterface> = ...

`Private` `Readonly` multipleEntryPropertyCollector

multipleEntryPropertyCollector: MultipleEntryPropertyCollector = ...

`Private` `Readonly` multipleInstanceSequenceCollector

multipleInstanceSequenceCollector: MultipleDocumentPropertyCollectorInterface<"instance_ids", InstanceSequenceInterface> = ...

`Private` `Readonly` polymerEntityToInstanceMap

polymerEntityToInstanceMap: Map<string, Promise<PolymerEntityInstanceTranslate>> = ...

`Private` `Readonly` searchRequestMap

searchRequestMap: Map<string, Promise<null | QueryResult>> = ...

Methods

`Private` getAssemblyInterfaces

getAssemblyInterfaces(assemblyId): Promise<AssemblyInterfacesTranslate>
Parameters
- assemblyId: string
Returns Promise<AssemblyInterfacesTranslate>
- Defined in src/RcsbRequest/RcsbRequestContextManager.ts:191

getEntityProperties

getEntityProperties(entityIds): Promise<PolymerEntityInterface[]>
Parameters
- entityIds: string | string[]
Returns Promise<PolymerEntityInterface[]>
- Defined in src/RcsbRequest/RcsbRequestContextManager.ts:80

getEntityToChromosome

getEntityToChromosome(entityIds): Promise<PolymerEntityChromosomeTranslate>
Parameters
- entityIds: string[]
Returns Promise<PolymerEntityChromosomeTranslate>
- Defined in src/RcsbRequest/RcsbRequestContextManager.ts:133

getEntityToInstance

getEntityToInstance(entryId): Promise<PolymerEntityInstanceTranslate>
Parameters
- entryId: string
Returns Promise<PolymerEntityInstanceTranslate>
- Defined in src/RcsbRequest/RcsbRequestContextManager.ts:110

getEntryProperties

getEntryProperties(entryIds): Promise<EntryPropertyIntreface[]>
Parameters
- entryIds: string | string[]
Returns Promise<EntryPropertyIntreface[]>
- Defined in src/RcsbRequest/RcsbRequestContextManager.ts:90

getEntryToAssembly

getEntryToAssembly(entryId): Promise<EntryAssemblyTranslate>
Parameters
- entryId: string
Returns Promise<EntryAssemblyTranslate>
- Defined in src/RcsbRequest/RcsbRequestContextManager.ts:119

getGroupMemberProperties

getGroupMemberProperties(groupQuery): Promise<GroupPropertiesProvider>
Parameters
- groupQuery: QueryPolymer_Entity_GroupArgs
Returns Promise<GroupPropertiesProvider>
- Defined in src/RcsbRequest/RcsbRequestContextManager.ts:138

getInstanceSequences

getInstanceSequences(instanceIds): Promise<InstanceSequenceInterface[]>
Parameters
- instanceIds: string | string[]
Returns Promise<InstanceSequenceInterface[]>
- Defined in src/RcsbRequest/RcsbRequestContextManager.ts:100

getInterfaceToInstance

getInterfaceToInstance(interfaceId): Promise<InterfaceInstanceTranslate>
Parameters
- interfaceId: string
Returns Promise<InterfaceInstanceTranslate>
- Defined in src/RcsbRequest/RcsbRequestContextManager.ts:169

getSearchQuery

getSearchQuery(searchQuery): Promise<null | QueryResult>
Parameters
- searchQuery: SearchQuery
Returns Promise<null | QueryResult>
- Defined in src/RcsbRequest/RcsbRequestContextManager.ts:151

getSearchQueryFacets

getSearchQueryFacets(query, facets, returnType, resultsContentType): Promise<null | QueryResult>
Parameters
- query: SearchQueryType
- facets: FacetType[]
- returnType: ReturnType
- resultsContentType: ResultsContentType
Returns Promise<null | QueryResult>
- Defined in src/RcsbRequest/RcsbRequestContextManager.ts:160

initializeArchesClient

initializeArchesClient(config): void
Parameters
- config: {
      fetch?: ((input, requestConfig?) => Promise<Response>);
      requestConfig?: RequestInit;
      uri?: string;
  }
  - Optional fetch?: ((input, requestConfig?) => Promise<Response>)
    - (input, requestConfig?): Promise<Response>
      Parameters
      input: RequestInfo
      Optional requestConfig: RequestInit
      Returns Promise<Response>
  - Optional requestConfig?: RequestInit
  - Optional uri?: string
Returns void
- Defined in src/RcsbRequest/RcsbRequestContextManager.ts:209

initializeBorregoClient

initializeBorregoClient(config): void
Parameters
- config: {
  api?: string;
  requestConfig?: RequestConfig;
  }
  - Optional api?: string
  - Optional requestConfig?: RequestConfig
Returns void
- Defined in src/RcsbRequest/RcsbRequestContextManager.ts:201

initializeYosemiteClient

initializeYosemiteClient(config): void
Parameters
- config: {
  api?: string;
  requestConfig?: RequestConfig;
  }
  - Optional api?: string
  - Optional requestConfig?: RequestConfig
Returns void
- Defined in src/RcsbRequest/RcsbRequestContextManager.ts:205

Class RcsbRequestContextManager

Hierarchy

Index

Constructors

Properties

Methods

Constructors

constructor

Returns RcsbRequestContextManager

Properties

Private Readonly assemblyCollector

Private Readonly assemblyInterfacesCollector

Private Readonly assemblyInterfacesMap

Private Readonly entityChrCollector

Private Readonly entityPropertyMap

Private Readonly entryPropertyMap

Private Readonly entryToAssemblyMap

Private Readonly groupMemberCollector

Private Readonly groupPropertyMap

Private Readonly instanceCollector

Private Readonly instanceSequenceMap

Private Readonly interfaceCollector

Private Readonly interfaceToInstanceMap

Readonly modelKey

Private Readonly multipleEntityCollector

Private Readonly multipleEntryPropertyCollector

Private Readonly multipleInstanceSequenceCollector

Private Readonly polymerEntityToInstanceMap

Private Readonly searchRequestMap

Methods

Private getAssemblyInterfaces

Parameters

assemblyId: string

Returns Promise<AssemblyInterfacesTranslate>

getEntityProperties

Parameters

entityIds: string | string[]

Returns Promise<PolymerEntityInterface[]>

getEntityToChromosome

Parameters

entityIds: string[]

Returns Promise<PolymerEntityChromosomeTranslate>

getEntityToInstance

Parameters

entryId: string

Returns Promise<PolymerEntityInstanceTranslate>

getEntryProperties

Parameters

entryIds: string | string[]

Returns Promise<EntryPropertyIntreface[]>

getEntryToAssembly

Parameters

entryId: string

Returns Promise<EntryAssemblyTranslate>

getGroupMemberProperties

Parameters

groupQuery: QueryPolymer_Entity_GroupArgs

Returns Promise<GroupPropertiesProvider>

getInstanceSequences

Parameters

instanceIds: string | string[]

Returns Promise<InstanceSequenceInterface[]>

getInterfaceToInstance

Parameters

interfaceId: string

Returns Promise<InterfaceInstanceTranslate>

getSearchQuery

Parameters

searchQuery: SearchQuery

Returns Promise<null | QueryResult>

getSearchQueryFacets

Parameters

query: SearchQueryType

facets: FacetType[]

returnType: ReturnType

resultsContentType: ResultsContentType

Returns Promise<null | QueryResult>

initializeArchesClient

Parameters

config: { fetch?: ((input, requestConfig?) => Promise<Response>); requestConfig?: RequestInit; uri?: string; }

`Private` `Readonly` assemblyCollector

`Private` `Readonly` assemblyInterfacesCollector

`Private` `Readonly` assemblyInterfacesMap

`Private` `Readonly` entityChrCollector

`Private` `Readonly` entityPropertyMap

`Private` `Readonly` entryPropertyMap

`Private` `Readonly` entryToAssemblyMap

`Private` `Readonly` groupMemberCollector

`Private` `Readonly` groupPropertyMap

`Private` `Readonly` instanceCollector

`Private` `Readonly` instanceSequenceMap

`Private` `Readonly` interfaceCollector

`Private` `Readonly` interfaceToInstanceMap

`Readonly` modelKey

`Private` `Readonly` multipleEntityCollector

`Private` `Readonly` multipleEntryPropertyCollector

`Private` `Readonly` multipleInstanceSequenceCollector

`Private` `Readonly` polymerEntityToInstanceMap

`Private` `Readonly` searchRequestMap

`Private` getAssemblyInterfaces

config: {
fetch?: ((input, requestConfig?) => Promise<Response>);
requestConfig?: RequestInit;
uri?: string;
}

`Optional` fetch?: ((input, requestConfig?) => Promise<Response>)

`Optional` requestConfig: RequestInit

`Optional` requestConfig?: RequestInit

`Optional` uri?: string

config: {
api?: string;
requestConfig?: RequestConfig;
}

`Optional` api?: string

`Optional` requestConfig?: RequestConfig

config: {
api?: string;
requestConfig?: RequestConfig;
}

`Optional` api?: string

`Optional` requestConfig?: RequestConfig