Class SequenceTrackFactory

Implements

TrackFactoryInterface<[AlignmentRequestContextType, string]>

Index

Constructors

Methods

addAuthorResIds buildSequenceData getTrack

Constructors

constructor

new SequenceTrackFactory(
    entityInstanceTranslator?: PolymerEntityInstanceTranslate,
    trackTitleFactory?: TrackTitleFactoryInterface<
        [AlignmentRequestContextType],
    >,
): SequenceTrackFactory
Parameters
- OptionalentityInstanceTranslator: PolymerEntityInstanceTranslate
- OptionaltrackTitleFactory: TrackTitleFactoryInterface<[AlignmentRequestContextType]>
Returns SequenceTrackFactory
- Defined in src/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/SequenceTrackFactory.ts:30

Methods

addAuthorResIds

addAuthorResIds(
e: RcsbFvTrackDataAnnotationInterface,
alignmentContext: AlignmentContextInterface,
): RcsbFvTrackDataElementInterface
Parameters
- e: RcsbFvTrackDataAnnotationInterface
- alignmentContext: AlignmentContextInterface
Returns RcsbFvTrackDataElementInterface
- Defined in src/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/SequenceTrackFactory.ts:88

buildSequenceData

buildSequenceData(
config: BuildSequenceDataInterface,
source: "from" | "to",
): RcsbFvTrackDataElementInterface[]
Parameters
- config: BuildSequenceDataInterface
- source: "from" | "to"
Returns RcsbFvTrackDataElementInterface[]
- Defined in src/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/SequenceTrackFactory.ts:60

getTrack

getTrack(
alignmentQueryContext: AlignmentRequestContextType,
querySequence: string,
): Promise<RcsbFvRowConfigInterface>
Parameters
- alignmentQueryContext: AlignmentRequestContextType
- querySequence: string
Returns Promise<RcsbFvRowConfigInterface>
Implementation of TrackFactoryInterface.getTrack
- Defined in src/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/SequenceTrackFactory.ts:35

src