Class RcsbFvAbstractModuleAbstract

ProtectedalignmentCollector

ProtectedalignmentTracks

ProtectedannotationCollector

ProtectedannotationTracks

ProtectedboardConfigData

ProtectedbuildConfig

Protected ReadonlyelementId

ProtectedpolymerEntityInstance

Protected ReadonlyrcsbFv

ProtectedreferenceTrack

ProtectedrowConfigData

ProtectedbuildAlignmentTracks

• buildAlignmentTracks(
      alignmentRequestContext: AlignmentRequestContextType,
      alignmentResponse: SequenceAlignments,
      trackFactories?: {
          alignmentTrackFactory?: TrackFactoryInterface<
              [AlignmentRequestContextType, TargetAlignments],
          >;
          sequenceTrackFactory?: TrackFactoryInterface<
              [AlignmentRequestContextType, string],
          >;
      },
  ): Promise<void>

  Parameters

  • alignmentRequestContext: AlignmentRequestContextType
  • alignmentResponse: SequenceAlignments
  • OptionaltrackFactories: {
        alignmentTrackFactory?: TrackFactoryInterface<
            [AlignmentRequestContextType, TargetAlignments],
        >;
        sequenceTrackFactory?: TrackFactoryInterface<
            [AlignmentRequestContextType, string],
        >;
    }

  Returns Promise<void>

ProtectedbuildAnnotationsTrack

• buildAnnotationsTrack(
      annotationsRequestContext: AnnotationRequestContext,
      annotationsFeatures: SequenceAnnotations[],
      annotationConfigMap?: AnnotationConfigInterface,
  ): Promise<void>

  Parameters

  • annotationsRequestContext: AnnotationRequestContext
  • annotationsFeatures: SequenceAnnotations[]
  • OptionalannotationConfigMap: AnnotationConfigInterface

  Returns Promise<void>

Protected AbstractconcatAlignmentAndAnnotationTracks

• concatAlignmentAndAnnotationTracks(): void

  Returns void

ProtectedgetBoardConfig

• getBoardConfig(): Promise<RcsbFvBoardConfigInterface>

  Returns Promise<RcsbFvBoardConfigInterface>

ProtectedgetRowsConfig

• getRowsConfig(): Promise<RcsbFvRowConfigInterface[]>

  Returns Promise<RcsbFvRowConfigInterface[]>

Protected AbstractprotectedBuild

• protectedBuild(): Promise<void>

  Returns Promise<void>