Class MsaAlignmentTrackFactory

Implements

TrackFactoryInterface<[AlignmentRequestContextType, TargetAlignments]>

Index

Constructors

Methods

getTrack prepareFeatures

Constructors

constructor

new MsaAlignmentTrackFactory(
entityInstanceTranslator?: PolymerEntityInstanceTranslate,
): MsaAlignmentTrackFactory
Parameters
- OptionalentityInstanceTranslator: PolymerEntityInstanceTranslate
Returns MsaAlignmentTrackFactory
- Defined in src/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/MsaAlignmentTrackFactory.ts:16

Methods

getTrack

getTrack(
alignmentQueryContext: AlignmentRequestContextType,
targetAlignment: TargetAlignments,
): Promise<RcsbFvRowConfigInterface>
Parameters
- alignmentQueryContext: AlignmentRequestContextType
- targetAlignment: TargetAlignments
Returns Promise<RcsbFvRowConfigInterface>
Implementation of TrackFactoryInterface.getTrack
- Defined in src/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/MsaAlignmentTrackFactory.ts:21

prepareFeatures

prepareFeatures(
unObservedRegions: SequenceAnnotations[],
positionalScores: SequenceAnnotations[],
): Promise<void>
Parameters
- unObservedRegions: SequenceAnnotations[]
- positionalScores: SequenceAnnotations[]
Returns Promise<void>
- Defined in src/RcsbFvWeb/RcsbFvFactories/RcsbFvTrackFactory/TrackFactoryImpl/MsaAlignmentTrackFactory.ts:28

src