Class RcsbFvConfig

Board track configuration manager className

Implements

Constructors

constructor

Properties

boardId displayColor? displayConfig? displayDomain? displayType dynamicDisplay? elementClickCallback? elementEnterCallback? elementId? elementLeaveCallback? hideEmptyTrackFlag? hideInnerBorder? hideRowGlow? highlightHoverCallback? highlightHoverElement? highlightHoverPosition? includeTooltip? interpolationType? length minRatio? nonEmptyDisplay? overlap range selectDataInRangeFlag? tooltipGenerator? trackColor? trackData? trackHeight? trackId trackWidth? updateDataOnMove?

Methods

addTrackData configCheck getInterpolationType resetTrackData updateConfig updateTrackData

Constructors

constructor

Properties

boardId

boardId: string

DOM element Id where the PFV will be rendered

OptionaldisplayColor

displayColor?: string | RcsbFvColorGradient

Annotation elements color

OptionaldisplayConfig

displayConfig?: RcsbFvDisplayConfigInterface[]

Array of display configurations in composite displays

OptionaldisplayDomain

displayDomain?: [number, number]

Y scale domain range

displayType

displayType: RcsbFvDisplayTypes

Type of data representation

OptionaldynamicDisplay

dynamicDisplay?: boolean

Type of data representation

OptionalelementClickCallback

elementClickCallback?: (
    d?: RcsbFvTrackDataElementInterface,
    e?: MouseEvent,
) => void

Function that will be called when annotations in this track are clicked

OptionalelementEnterCallback

elementEnterCallback?: (
    d?: RcsbFvTrackDataElementInterface,
    e?: MouseEvent,
) => void

Function that will be called when clicking annotations in this track

OptionalelementId

elementId?: string

DOM element Id where the board track is displayed

OptionalelementLeaveCallback

elementLeaveCallback?: (
    d?: RcsbFvTrackDataElementInterface,
    e?: MouseEvent,
) => void

Function that will be called when mouse-leaving a track annotation

OptionalhideEmptyTrackFlag

hideEmptyTrackFlag?: boolean

Hide tracks with no visible data. Needs selectDataInRangeFlag = true

OptionalhideInnerBorder

hideInnerBorder?: boolean

Hide bottom border (last row is ignored)

OptionalhideRowGlow

hideRowGlow?: boolean

Hide row hover glow

OptionalhighlightHoverCallback

highlightHoverCallback?: (n: RcsbFvTrackDataElementInterface[]) => void

Function call on hover event

OptionalhighlightHoverElement

highlightHoverElement?: boolean

Set highlight hover track elements

OptionalhighlightHoverPosition

highlightHoverPosition?: boolean

Set highlight hover position

OptionalincludeTooltip

includeTooltip?: boolean

Show tooltip when hovering annotations in this specific track

OptionalinterpolationType

interpolationType?: string

Interpolation type for sequence scalar annotations

length

length: number

Length of the track. If length is provided the track coordinates will range from 1 to

OptionalminRatio

minRatio?: number

Residue density threshold used to display/hide annotations

OptionalnonEmptyDisplay

nonEmptyDisplay?: boolean

Flag used in sequence display type to force displaying a line when sequence objects are not visible

overlap

overlap: boolean = false

If true, track annotations can overlap

range

range: { max: number; min: number }

Range of the track. If range is provided the track coordinates will range from to

OptionalselectDataInRangeFlag

selectDataInRangeFlag?: boolean

Only data that fall in the current feature viewer range in rendered

OptionaltooltipGenerator

tooltipGenerator?: RcsbFvTooltipInterface

Tooltip generation

OptionaltrackColor

trackColor?: string

Background color of the track

OptionaltrackData

trackData?: RcsbFvTrackData<{ [k: string]: any }>

Data structure containing the annotations

OptionaltrackHeight

trackHeight?: number

Full length of the track

trackId

trackId: string

Id used to identify the board track

OptionaltrackWidth

trackWidth?: number

Full length of the track

OptionalupdateDataOnMove

updateDataOnMove?: (
    d: LocationViewInterface,
) => Promise<RcsbFvTrackData<{ [k: string]: any }>>

Function that will be called to update track displayed data when the board is moved or zoomed

Methods

addTrackData

configCheck

getInterpolationType

resetTrackData

updateConfig

updateTrackData

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