Codifies the alignment data a sequence of one-letter residue codes and the information on the chain and residue numbers for the aligned regions

Hierarchy

  • SequenceAlignment

Properties

gaps?: AlignmentGap[]

List of empty regions (gaps) in the alignment sequence

regions: AlignmentRegion[]
sequence?: string

A sequence of one-letter residue codes in the order they appear in the alignment (gap characters are permitted). Gaps that have been introduced into the sequences to make them align are indicated by the '-' character

Generated using TypeDoc